DNA Sequence Analysis

Lab Tools

EBM
Diagnosis
Therapy
Prognosis
Etiology
Checklists
Systematic Reviews
ANNs
Statistical Modeling
Links

Bioinformatics Links
Genomic Mapping
RNA Sequence Analysis
DNA Sequence Analysis
Protein Structure
Biological Pathways
Microarrays
Proteomics
Nucleotide Polymporphisms
Promoter Prediction Promoter Characterization Gene Prediction
Visualization Tools Genome Browsing Dual Genome Prediction

Promoter Prediction

Site Host
FIRSTEF Cold Spring Harbor Laboratory
Dragon Promoter Finder Knowledge Extraction Laboratory, Singapore
PromoterScan Center for Information Technology, NIH
FunSiteP Promoter Prediction Institute of Cytology and Genetics, Novosibirsk, Russia
Promoter 2.0 Prediction Server Technical University of Denmark, Lyngsby, Denmark
Neural Network Promoter Prediction Berkeley Drosophila Genome Project

Promoter Characterization

Site Host
MEME San Diego Supercomputing Center, UCSD
BioProspector Stanford Medical School
RSA Tools Université Libre de Bruxelles, Belgium
AlignACE Harvard Medical School

Gene Prediction

Site Host
GRAIL Oak Ridge National Laboratory
GENSCAN Massachusetts Institute of Technology
FGENES Softberry Inc., Mount Kisko, NY
GAZE Sanger Institute
GENEID University of Barcelona
GENIE Berkeley Drosophila Genome Project
GENEWISE2 European Bioinformatics Institute
HMMgene Technical University of Denmark, Lyngsby, Denmark
METAGENE Medical College of Wisconsin

Visualization Tools

Site Host
ENCODE National Human Genome Research Instititute, NIH
Repeat Masker Server University of Washington
GFF Sanger Institute
GFF2PS University of Barcelona

Genome Browsing

Site Host
ENSEMBL Sanger Institute
NCBI Map Viewer NCBI
UCSC Genome Browser University of California at Santa Cruz

Dual Genome Gene Prediction

Site Host
SLAM University of California at Berkeley
sgp2 University of Barcelona